Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRRTGQRWRGTLPGRRPWTRPAPATCRRHLAFVELRHYFARVMSSAIGSVARWIVPLLGVAAVASIGVIADPVRVVRAPALILVDAANPLAGKPFYVDPASAAMVAA-------RNANPPNAELTSVANTPQSYWLDQAFPPATVGGTVARYTGAAQ--AAGAMPVLTLYGIPHRDCGSYASGGFA-----TGTDYRGWIDAVASGLGSS-----PATIIVEPDALAMAD-------CLSPDQRQERFDLVRYAVDTLTRDPAAAVYVDAGHSRWLSA--------EAMAARLNDV----GVGRARGFSLNVSNFYTTD--------------EEIGYGEAISGL----TNGSHYVIDTSRNGAGPAPDAPLNWCNPSGRALGAPPTTAT---AGAHADAYLWIKRPGESDGTC-----------G-----RGEPQAGRFVSQYAIDLAHNAGQ |
| 3A9B Chain:A ((12-377)) | --------------------------------------------------------------------------------------SVNPYIGRSPLVIKSYAEKLEETIAYFEAQGDELNAARTRTVQGIPTFAWISDSATIDTIQPLIADAVAHQEASGEQVLVQLVIYNLPDRDCAAKASDGEFHLDDDGANKYRAYVDRIVAELSTADADKLHFSIVLEPDSLGNMVTNMHVPKCQGA--ATAYKEGIAYTIASLQ-KPNIDLYIDAAHGGWLGWNDNLRPSAEIFKETLDLARQITPNATVRGLAINVSNYNPYKTRAREDYTEWNNAYDEWNYVKTLTPHLQAVGFPAQFIVDQGRSGREGIRTEWGQWCNIRNAGFGIRPTTDQAIVDSANVDAIVWVKPGGESDGTSDVNAVRFDENCRSPASHVPAPEAGEWFNEFVVNLVINANP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A9B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72309 for 2368 contacts (-30.5/contact) +
2D Compatibility (PS) -31684 + (NN) -20464 + (LL) 7228
1D Compatibility (HY) -15600 + (ID) 3800
Total energy: -136629.0 ( -57.70 by residue)
QMean score : 0.522
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