Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDECVVDAAAVVDALAGKGASAIVLRGLL-KESISNAPHLLDAEVGHALRRAVLSDEISEEQARAALDALPYLIDNRYPHSPRLIEYTWQL--R-----HNVTFYDALYVALATALDVPLLTGD-SRLAAAPGLPCEIKLVR
3ZVK Chain:A ((1-126))
-MIYMLGTNICVYAINKHPDSYYNNLELLAKNNTIAISSIVLAELQYGVSKSKK-----KEQNQSKLDIFLS-RLEIIDFSAKCTFYYGELRTELEQKGLIIGNNDLLIASHAIAENATLVTNNIKEFKRIPN---------
General information:
TITO was launched using:
RESULT:
Template:
3ZVK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56430 for 828 contacts (-68.2/contact) +
2D Compatibility (PS) -13188 + (NN) -8351 + (LL) 1492
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -81577.0 ( -98.52 by residue)
QMean score : 0.437
(partial model without unconserved sides chains):
PDB file :
Tito_3ZVK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZVK-query.scw
PDB file :
Tito_Scwrl_3ZVK.pdb
: