Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSPGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTR-AALPAIRPVNHLVVDGRVIGRTR--LTAKVSVAVRSSADAGVVVAYEADDLDP-------RRRTGWSVVVTGLATEVSDPEQVARY-QRLLHPW-----V----NMAMDTVVAIEPEIVTGIRIVADSRTP
2FG9 Chain:A ((20-172))
------------MKTIVIEDKQRIESIILQADACFVGITDLEGNPYVVPMNFGYENDTLYLHSGPEGGKIEMLQR------NNNVCITFSLGHKLVYQHCSYSMRSESAMCRGKVEFIEDMEEKRHALDIIMRHYTKDQFSYSDPAVRNVKVWKVPVDQMTGKVFGL-----
General information:
TITO was launched using:
RESULT:
Template:
2FG9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69810 for 894 contacts (-78.1/contact) +
2D Compatibility (PS) -14640 + (NN) -6043 + (LL) 272
1D Compatibility (HY) -1200 + (ID) 800
Total energy: -92221.0 ( -103.16 by residue)
QMean score : 0.498
(partial model without unconserved sides chains):
PDB file :
Tito_2FG9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FG9-query.scw
PDB file :
Tito_Scwrl_2FG9.pdb
: