Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----MSARCQITGRTVGFGKAVSHSHRRTRRRWPPNIQLKAYYLPSEDRRIKVRVSAQGIKVIDRDGHRGRRRAARAGSAPAHFARQAGSSLRTAAIL
2JZ6 Chain:A ((1-77))
QGHMIMAKRCEVCGKAPRSGNTVSHSDKKSERWFRPNLQKVRVVLP-DGTIKRMRVCTSCLKSGKVKKYVGQVSEVGS---------------------
General information:
TITO was launched using:
RESULT:
Template:
2JZ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3836 for 418 contacts (9.2/contact) +
2D Compatibility (PS) -7546 + (NN) -3057 + (LL) 1372
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -8745.0 ( -20.92 by residue)
QMean score : 0.282
(partial model without unconserved sides chains):
PDB file :
Tito_2JZ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JZ6-query.scw
PDB file :
Tito_Scwrl_2JZ6.pdb
: