Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTPVILVAGQDHT--DEVTGALLR-R---TGTVVVEHRFDGHVVRRMTATLSRGELITTEDALEFAHGCVSCTIRDDLLVLLRRLHRRDNVGRIVVHLAPWLEPQPICWAIDHVRVCVGHGYPDGPAALDVRVAAVVTCVDCVRWLPQSLGEDELPDGRTVAQVTVGQAEFADLLVLTHPE-P----V----AVAVLRRLAPRARITGGVDRVELALAHLDDNSRRGRTDTPHTPLLAGLPPLAADGEVAIVEFSARRPFHPQRLHAAVDLLLDGVVRTRGRLWLANRPDQVMWLESAGGGLRVASAGKWLAAMAASEVAYVDLERRLFADLMWVYPFGDRHTAMTVLVCGADPTDIVNALNAALLSDDEMASPQRWQSYVDPFGDWHDDPCHEMPDAAGEFSAHRNSGESR |
| 2WSM Chain:A ((29-192)) | -GTVAVNIMGAIGSGKTLLIERTIERIGNEVKIGAMLGDVVSKADYERVRRF-------GIKAEAISTGKECHLDAHMIYHRLKK---FSDCDLLLIENVGNLI-----CPVD-F---------------DLGENYRVVMVSVTEGDDVV-------------EKHPEIFRVADLIVINKVALAEAVGADVEKMKADAKLINPRAKIIE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2WSM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -115872 for 1170 contacts (-99.0/contact) +
2D Compatibility (PS) -15550 + (NN) -1995 + (LL) 14184
1D Compatibility (HY) -1200 + (ID) 950
Total energy: -121383.0 ( -103.75 by residue)
QMean score : 0.387
|
|
|