Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVWITGAGGMMGSHLAEMLLAAGHDVYATYCRPTIDPSDLQFNGAE---VDITDWCSVYDSIATFRPDAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALRRV--RPHAKIIVAGSSAEYGFVDPSEVPINERRELRPLHPYGVSKAATDMLAYQYHKSYGMHTVVARIFNCTGPRKVGDALSDFVRRCTWLEHHPEQSA-IRVGNLKTKRTIVDVRDLNRALMLMLDKGEAGADYNVGGSIAYEMGDVLKQVIAACKRDD---IVPEVDPALLRPTDEKIIYGDCSKLAAITGWQQEICLTQTIADMFDYWRSKSESALMV |
| 4LW8 Chain:B ((20-321)) | -RAFVTGLTGFTGRYMAERLQAAGYDVWGTVAPGTPRPADPAFAQCTLLPVDLLDAEAMRAAAADARPDAVVHLAARA-------EPSQTYAVNIVGTRNLLAALSGLDRRPSA-VLLASSANIYG--NSTAGVLDETVAPAPANDYAVSKLAMEYAAKLWADR--LPIVIARPFNYTG---VGQ--SDAYLLPKLVAHYARNAPRISLGNLDVSRDFSDVRDVTAAYLKLIEAAPAGETFNVCSERAYS----LKEVLAMLSRIAGYVIDVTIDPRFVRHNEVKSLSGSRDKLRRAVGELPVTPLDETLRWMVDAMRA-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LW8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162999 for 2424 contacts (-67.2/contact) +
2D Compatibility (PS) -30944 + (NN) -13511 + (LL) 2404
1D Compatibility (HY) -13600 + (ID) 5000
Total energy: -223650.0 ( -92.26 by residue)
QMean score : 0.478
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