Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCTARTAEEIFVETIAVKTRILNDRVLLEAARAIGDRLIAGYRAGARVFMCGNGGSAADAQHFAAELTGHLIFDRPPLGAEALHANSSHLTAVANDYDYDTVFARALEGSARPGDTLFAISTSGNSMSVLRAAKTARELGVTVVAMTGESGGQLAEFADFLINVPSRDTGRIQESHIVFIHAISEHVEHALFAPRQ
2X3Y Chain:D ((41-217))
----------------VMAAMLADERLLATVRKVADACIASIAQGGKVLLAGNGGSAADAQHIAGEFVSRFAFDRPGLPAVALTTDTSILTAIGNDYGYEKLFSRQVQALGNEGDVLIGYSTSGKSPNILAAFREAKAKGMTCVGFTGNRGGEMRELCDLLLEVPSADTPKIQEGHLVLGHIVCGLVEHSIFG---
General information:
TITO was launched using:
RESULT:
Template:
2X3Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -128514 for 1510 contacts (-85.1/contact) +
2D Compatibility (PS) -19560 + (NN) -10957 + (LL) 2076
1D Compatibility (HY) -16800 + (ID) 3900
Total energy: -177655.0 ( -117.65 by residue)
QMean score : 0.577
(partial model without unconserved sides chains):
PDB file :
Tito_2X3Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2X3Y-query.scw
PDB file :
Tito_Scwrl_2X3Y.pdb
: