Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVAERAGHQWCLFLDRDGVINRQVVGDY-VRNWRQFEWLPGAARALKKLRAWAPYIVVVTNQQGVGAGLMSAVDVMVIHRHLQMQLASDGVLIDGFQVCPHHRSQRCGCRKPRPGLVLDWLGRHPDSEPLLSIVVGDSLSDLELAHNVAAAAGACASVQIGGASSGGVADASFDSLWEFAVAVGHARGERG
2FPX Chain:B ((14-152))
--------QKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYL---A-MDRANSYVIGDRATDIQLAENM-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2FPX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83017 for 972 contacts (-85.4/contact) +
2D Compatibility (PS) -15023 + (NN) -12164 + (LL) 2916
1D Compatibility (HY) -8000 + (ID) 2250
Total energy: -117538.0 ( -120.92 by residue)
QMean score : 0.404
(partial model without unconserved sides chains):
PDB file :
Tito_2FPX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FPX-query.scw
PDB file :
Tito_Scwrl_2FPX.pdb
: