Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGISRRTFGLAAGFGAIGAGGLGGGCSTRSGPTPTPEPASRGVGVVLSHEQFRTDRLVAHAQAAEQAGFRYVWASDHLQPWQDNEGHSMFPWLTLALVGNSTSSILFGTGVTCPIYRYHPATVAQAFASLAILNPGRVFLGLGTGERLNEQAATDTFGN-YRERHDRLIEAIVLIRQLWSGERISFTGHYFRTDELKLYDTPAMPPPIFVAASGPQSATLAGRYGDGWIAQARDI-NDAKLLAAFAAGAQAAGRDPTTLGKRAELFAVVGDDKAAARAADLWRFTAGAVD-----------QP-N-PVEIQ----RA-----AESNPIEKVLANWAVGTDPGVHIGAVQAVLDAGAVPFLHFP-Q-DDPITAIDFYRTNVLPELR |
| 1Z69 Chain:A ((1-327)) | -----------------------------------------MKFGIEFVPSD-PALKIAYYAKLSEQQGFDHVWITDHYN--------NRDVYSTLTVLALNTNSIKIGPGVTNSYT-RNPAITASSIASIAEISGGRAVLGLGPGD-KATFD---AMGIAWKKPLATTKEAIQAIRDFISGKKVSMDGEMIKFAGAKLAFKA-GNIPIYMGAQGPKMLELAGEIADGVLINASHPKDFEVAVEQIKKGAEKAGRDPSEVDVTAYACFSIDKDPVKAVNAAKVV-VAFIVAGSPDLVLERHGIPVEAKSQIGAAIAKGDFGALMGGLVTPQMIEAFSICGTPDDCMKRIKDLEAIGVTQIVAGSPIGPAKEKAIKLIGKEIIAK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z69.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -167761 for 2561 contacts (-65.5/contact) +
2D Compatibility (PS) -32971 + (NN) -19912 + (LL) 1068
1D Compatibility (HY) -11600 + (ID) 3700
Total energy: -234876.0 ( -91.71 by residue)
QMean score : 0.518
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