Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTRTRSGSLAAGGLNWASLPLKLFAGGNAKFWHPADIDFTRDRADWEKLSDDERDYATRLCTQFIAGEEAVTEDIQPFMSAMRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISED-LHRYLDDLPAYRQIFY-AELPECLNALSADPSPAAQVRASVTYNHIVEGMLALTGYYAWHKICVERAILPGMQELVRRIGDDERRHMAWGTFTCRRHVAADDA----NWTVFETRMNELIPL-ALRLIEEGFALYGDQPPFDLSKDDFLQYSTDKGMRRFGTISNARGRPV---AEIDVDYSPAQLEDTFADEDRRTLAAASA |
3EE4 Chain:A ((11-299)) | -TRTRSGSLAAGGLNWASLPLKLFAGGNAKFWHPADIDFTRDRADWEKLSDDERDYATRLCTQFIAGEEAVTEDIQPFMSAMRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISEDLHRYLD-DLPAYR-QIFYAELPECLNALSADPSPAAQVRASVTYNHIVEGMLALTGYYAWHKICVERAILPGMQELVRRIGDDERRHMAWGTFTCRRHVAADDANWTVFETRMNELIPLALRLIEEGFALYGD---QPP--FDLSKDDFLQ---YSTDKGMRRFGTISNARGRPVAEIDV------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EE4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102030 for 2235 contacts (-45.7/contact) +
2D Compatibility (PS) -29501 + (NN) -7970 + (LL) 2072
1D Compatibility (HY) -28800 + (ID) 11450
Total energy: -177679.0 ( -79.50 by residue)
QMean score : 0.419
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