Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRILVTGGVRSGKSTHAEALLGDAA---DVVYVAPGRPAAGSDPDWDARVALH-RARRPPTWLTVET-ADVATALSEARSPVLVDCLGTWLTAIMDGEALWSAATADVYAVLEARLDGLCAALTGLP-TAIVVTNEVGLGVVPSHSSGVLFRDLLGTINRR--------------VAAVCDEVHLVIAGRVLKL
3RLF Chain:A ((31-214))
-FVVFVGPSGCGKSTLLRMIAGLETITSGDLFIG-EKRMNDTP-PAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEVLQLAHL-LDRKP-KALSGGQRQRVAIGRTL--VAEPSVFLLDEPLSNLDAAL--RVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQ-
General information:
TITO was launched using:
RESULT:
Template:
3RLF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85882 for 1106 contacts (-77.7/contact) +
2D Compatibility (PS) -17472 + (NN) -5491 + (LL) 248
1D Compatibility (HY) -5200 + (ID) 1100
Total energy: -114897.0 ( -103.89 by residue)
QMean score : 0.290
(partial model without unconserved sides chains):
PDB file :
Tito_3RLF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RLF-query.scw
PDB file :
Tito_Scwrl_3RLF.pdb
: