Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQIMYNYPAMLGHAGDMAGYAGTLQSLGAEIAVEQAALQSAWQGDTGITYQAWQAQWNQAMEDLVRAYHAMSSTHEANTMAMMARDTAEAAKWGG
3H6P Chain:C ((20-75))
-------------------GYAGTLQSLGADIASEQAVLSSAWQGDTGITYQGWQTQWNQALEDLVRAYQSMSGT---------------------
General information:
TITO was launched using:
RESULT:
Template:
3H6P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12809 for 278 contacts (-46.1/contact) +
2D Compatibility (PS) -6469 + (NN) -3867 + (LL) 2988
1D Compatibility (HY) -5600 + (ID) 2300
Total energy: -28057.0 ( -100.92 by residue)
QMean score : 0.292
(partial model without unconserved sides chains):
PDB file :
Tito_3H6P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H6P-query.scw
PDB file :
Tito_Scwrl_3H6P.pdb
: