Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHESRLASARLYLCTDARRERGDLAQFAEAALAGGVDIIQLRDKGS---PGELRFGPLQARDELAACEILADAAHRYGALFAVNDRADIARAAGADVLHLGQRDLPVNVARQILAPDTLIGRSTHDPDQVAAAAAGDADYFCVGPCWPTPTKP-GRAAPGLGLVRVAAELGGDDKPWFAIGGINAQRLPAVLDAGARRIVVVRAITSADDPRAAAEQLRSALTAAN
1G4S Chain:B ((19-219))
----------VYFIMGSNNTKADPVTVVQKALKGGATLYQFREKGGDALTGEARIKF--AEKAQAAC-------REAGVPFIVNDDVELALNLKADGIHIGQEDANAKEVRAAIG-DMILGVAAHTMSEVKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIE-AVRRQGISIPIVGIGGITIDNAAPVIQAGADGVSMISAISQAEDPESAARKFREEI----
General information:
TITO was launched using:
RESULT:
Template:
1G4S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127828 for 1660 contacts (-77.0/contact) +
2D Compatibility (PS) -22721 + (NN) -21201 + (LL) 2412
1D Compatibility (HY) -10000 + (ID) 3350
Total energy: -182688.0 ( -110.05 by residue)
QMean score : 0.576
(partial model without unconserved sides chains):
PDB file :
Tito_1G4S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G4S-query.scw
PDB file :
Tito_Scwrl_1G4S.pdb
: