Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKRPLRWLTEQITLAGMRPPISPQLLINRPAMQPVDLTGKRILLTGASSGIGAAATKQFGLHRAVVVAVARRKDLLDAVADRITGDGGT-AMSLPCDLSDMEAIDALVEDVEKRIGGIDILINNAGRSIRRPLAESL-ERWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFS--VYNASKAALSAVSRIIETEWGSQGVHSTTLYYPLVATPMIAPTKAYDGLPALTAAEAAEWMVTAARTRPVRIAPRVAVAVNALDSIGPRWVNALMQRRNEQLNP |
3AI2 Chain:G ((5-193)) | -------------------------------------ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKW---QFYWELHVMAAVRLARGLVPGMRARGGGAIIHNAS---ICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTP------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AI2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107500 for 1528 contacts (-70.4/contact) +
2D Compatibility (PS) -20326 + (NN) -9185 + (LL) 8424
1D Compatibility (HY) -12400 + (ID) 3450
Total energy: -144437.0 ( -94.53 by residue)
QMean score : 0.478
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