Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARVSGAAAAEAALMRALYDEHAAVLWRYALRLTGDAAQAEDVVQETLLRAWQHPEVIGDTARPARAWLFTVARNMIIDERRSARFRNVVGSTD---QSGTPE---QSTPDEVNAALDRLLIADALAQLSAEHRAVIQRSYYRGWSTAQIATDLGIAEGTVKSRLHYAVRALRLTLQELGVTR
1OR7 Chain:A ((9-187))
-VLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPS-GDVPDVVQEAFIKAYRALDSFRG-DSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIEAENFESGGA----NLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREAIDNKVQP-----
General information:
TITO was launched using:
RESULT:
Template:
1OR7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73070 for 1018 contacts (-71.8/contact) +
2D Compatibility (PS) -18410 + (NN) -14549 + (LL) 756
1D Compatibility (HY) -5600 + (ID) 1550
Total energy: -112423.0 ( -110.44 by residue)
QMean score : 0.505
(partial model without unconserved sides chains):
PDB file :
Tito_1OR7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OR7-query.scw
PDB file :
Tito_Scwrl_1OR7.pdb
: