Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPDNTIQWDKDADGIVTLTMDDPSGSTNVMNEAYIESMGKAVDRLVAEKDSITGVVVASAKKTFFAGGDVKTMIQA-RPEDAGDVFNTVETIKRQLRTLETLGKPVVAAINGAALGGGLEIALACHHRIAADVKGSQLGLPEVTLGLLPGGGGVTRTVRMFGIQNAFVSVLAQGTRFKPAKAKEIGLVDELVATVEELVPAAKAWIKEELKANPD-GAGVQPWDKK----GYKMPGGTPSSPGLAA--ILPSFPSNLRKQLKGAPMPAPRAILAAAVEGAQVDFDTASRIESRYFASLVTGQVAKNMMQAFFFDLQAINAGGSRPEGIGKTPIKRIGVLGAGMMGAGIAYVSAKAGYEVVLKDVSLEAAAKGKGYSEKLEAKALERGRTTQERSDALLARITPTADAADFKGVDFVIEAVFENQELKHKVFGEIEDIVEPNAILGSNTSTLPITGLATGVKRQEDFIGIHFFSPVDKMPLVEIIKGEKTSDEALARVFDYTLAIGKTPIVVNDSRGFFTSRVIGTFVNEALAMLGEGVEPASIEQAGSQAGYPAPPLQLSDELNLELMHKIAVATRKGVEDAGGTYQPHPAEAVVEKMIELGRSGRLKGAGFYEYADGKRSGLWPGLRETFKSGSSQPPL--------QDMIDRMLFAEALETQKCLDEGVLTSTADANIGSIMGIGFPPWTGGSAQFIVGYSGPAGTGKAAFVARARELAAAYGDRFLPPESLLS |
| 1WDK Chain:B ((16-691)) | -------------GIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADA-SVKGVIVSSGKDVFIVGADITEFVENFKLPDAELIAGNLEA-NKIFSDFEDLNVPTVAAINGIALGGGLEMCLAADFRVMAD--SAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNA-VEWIASGKENRAEDALKVSAVDAVV-TADKLGAAALDLIKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGFVAGQAGPNYP---------APVEAIKTIQKAANFGR----DKALEVEAAGFAKLAKTS-ASNCLIGLFLNDQELKKKAKVYDKIAKD-VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGNVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDLAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPD----RMKDDRRSAIDALYEAKRLGQKNGKGFYAY-EAD----QKKLVDSSVLEVLKPIVYEQRDVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVYGIGFPLFRGGALRYI------DSIGVAEFVALADQYA--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WDK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -225594 for 5772 contacts (-39.1/contact) +
2D Compatibility (PS) -71705 + (NN) -30368 + (LL) 2428
1D Compatibility (HY) -47600 + (ID) 11950
Total energy: -384789.0 ( -66.66 by residue)
QMean score : 0.530
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