Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQEPLRVPPSAPARLVVLASGTGSLLRSLLDAAVGDYPARVVAVGVDRECRAA--EIAAEASVPVFTVRLADHPSRDAWDVAITAATAAHEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPALLPAFPGTHGVADALAYGVKVTGATVHLVDAGTDTGPILAQQPVPVLDGDDEETLHERIKVTERRLLVAAVAALATHGVTVVGRTATMGRKVTIG
1ZLY Chain:A ((1-186))
------------ARVAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALETGVTVTGCTVHFVAEDVDAGQIILQEAVPVKRGDTVATLSERVKLAEHKIFPAALQLVAS-------------------
General information:
TITO was launched using:
RESULT:
Template:
1ZLY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129447 for 1468 contacts (-88.2/contact) +
2D Compatibility (PS) -20855 + (NN) -14100 + (LL) 1608
1D Compatibility (HY) -11200 + (ID) 3450
Total energy: -177444.0 ( -120.87 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_1ZLY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZLY-query.scw
PDB file :
Tito_Scwrl_1ZLY.pdb
: