Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEPLLVVGLGNPGANYARTRHNLGFVVADLLAARLGAKFKAHKRSGAEVATGRSAGRSLVLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLRSVVAALGTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIEQGMEPAQNRVHAW
4IKO Chain:A ((1-190))
MSNISLIVGLGNPGSEYAQTRHNAGFWFVEQLADKYGITLKNDPKFHGISGRGNIEGHDVRLLLPMTYMNRSGQSVVPFSKFYQIAPEAILIAHDELDMNPGVIRLKTGGGHGGHNGLRDIVPHIGP-NFHRLRIGIGHPGSKERVSGHVLGKAPSNEQSLMDGAIDHALSKVKLLVQGQVPQAMNQINAY
General information:
TITO was launched using:
RESULT:
Template:
4IKO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118337 for 1622 contacts (-73.0/contact) +
2D Compatibility (PS) -20119 + (NN) -3505 + (LL) 64
1D Compatibility (HY) -13600 + (ID) 3750
Total energy: -159247.0 ( -98.18 by residue)
QMean score : 0.532
(partial model without unconserved sides chains):
PDB file :
Tito_4IKO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IKO-query.scw
PDB file :
Tito_Scwrl_4IKO.pdb
: