Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAAL----IEIITDVVEEICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQP----DPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSARHRSYGR |
4Q9M Chain:B ((12-239)) | -----------------------------QVPAHIGIIMDGNGRWAKKRMQPRV-FGHKAGMEALQTVTKAANKLGVKVITVYAFSTENWTRPDQEVKFIMNLPVEFYDNYVPELHA--NNVKIQMIGETDRLPKQTFEALTKAEELTKNNTGLILNFALNYGGRAEITQALK-LISQDVLDAKINP---GDITEELIGNYLFTQHLPKDLRDPDLIIRTSGELRLSNFLPWQGAYSELYFTDTLWPDFDEAALQEAILAYNRR------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q9M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122644 for 1719 contacts (-71.3/contact) +
2D Compatibility (PS) -23944 + (NN) -6264 + (LL) 3184
1D Compatibility (HY) -16800 + (ID) 3900
Total energy: -170368.0 ( -99.11 by residue)
QMean score : 0.571
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