Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVGDCPRSRTVRWSWDTGHVTAEPQPTPRPAKPRLLQDGRDMFWSLAPLVVGCILLAGLVGMCSFQLGGTKRGPIPSYDAAQALRADAKTLGFPIRLPQLPGGWTPNSGGRGGIENGRAD-PATGQRRNAATSIVGFISPTGRYLSLTQSNADEDKLVGSIH-PSMYPTGTVDVGGTRWVVYEGSDENGAVEPVWTTRLTGPGGATQLAITGAGSIDQFRTLASATQSQ----------PPLPAR------ |
| 3GYT Chain:A ((3-244)) | --YTLSEKDLKELDSIRDSFQCMNEPLDNDQQASTLAKKEHNPTDILNVMD--ITMRRLVKMAKRLGAFNEISEAGKFSLLKGGMIEMLTIRGVTVFNADKGVWQTPVDGHSQISFNMFDKLRPDIKDTQKKGFLHFFNLLHSDVRK---NDLAIDIIVLMVLFDSKREGLVSQQDKETVEKLHRNYESLLHRYLYSI--HKEEAEQRFASIPKALVALRKVAENAVTLFLGAGNTTEAASLPKEFFATNY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GYT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1077 for 1653 contacts (0.7/contact) +
2D Compatibility (PS) -23464 + (NN) -6818 + (LL) 656
1D Compatibility (HY) -3200 + (ID) 1150
Total energy: -32899.0 ( -19.90 by residue)
QMean score : 0.216
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