Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEGFAGKVAVVTGAGSGIGQALAIELARSGAKVAISDVDTDGLADTEHRLKAISTP-VKTDRLDVTEREAFLAYADAVNEHFGTVNQIYNNAGI---AFTGDIEVSQFKDIERVMDVDFWGVVNGTKAFLPHLIASGDGHVINISSVFGLFSAPGQAAYNSAKFAVRGFTEALRQEMALAGHPVKVTTVHPGGVKTAIARNATAAEGLDQAELAETFDKRVAHLSPQRAAQIILTGVAKNKARVLVGVDAKVLDLVVRLTGSGYQRIFPIITGRLIPRPR |
4NBT Chain:B ((2-217)) | -KKLEGKVAVITGGAKGLGQAIALAYAEEGAKVIAGD-----LGDLTY-----SHPNVEGMYLNVTDVTGVEKFYQSVIDKYGKIDILVNNAGITKDAMTRKMTEAQW---DAVIDVNLKGVFNLTRLVGPQMQTNGYGSIINISSVVGVFGNIGQANYAATKAGVIGLTMTWAKEFALKGANVRVNAIAPGYIMTDILK--TVPQDLLDKFAALTMLNRLGQ--PEEIAKVAL---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NBT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69996 for 1734 contacts (-40.4/contact) +
2D Compatibility (PS) -23392 + (NN) -10658 + (LL) 4444
1D Compatibility (HY) -18400 + (ID) 4000
Total energy: -122002.0 ( -70.36 by residue)
QMean score : 0.475
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