Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKPTSAGQADDALVRLARERFDLPDQVRRLARPPVPSLEPPYGLRVAQLTDAEMLAEWMNRPHLAAAWEYD---WPASRWRQHLNAQLEGTYSLPLIGSWHGTDGGYLELYWAAKDLISHY-YD-ADPYDLGLHAAIADLSKVNRGFGPLLLPRIVASVFANEPRCRRIMFDPDHRNTATRRLCEWAGCKFLGEHDTTNRRMALYALEAPTTAA
4QC6 Chain:A ((3-161))
-------------------------------------IVENEICIRTLIDDDFPLMLKWLTDERVLEFYGGRDKKYTLESLKKHYTEPWE-DEVFRVIIEYNNVPIGYGQIYKMYDELYTDYHYPKTDEIVYGMDQFIGEPNYWSKGIGTRYIKLIFEFLK-KERNANAVILDPHKNNPRAIRAYQKSGFRIIEDLPE-----------------
General information:
TITO was launched using:
RESULT:
Template:
4QC6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94894 for 1051 contacts (-90.3/contact) +
2D Compatibility (PS) -16377 + (NN) -4297 + (LL) 3832
1D Compatibility (HY) -12000 + (ID) 1250
Total energy: -124986.0 ( -118.92 by residue)
QMean score : 0.411
(partial model without unconserved sides chains):
PDB file :
Tito_4QC6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QC6-query.scw
PDB file :
Tito_Scwrl_4QC6.pdb
: