Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEPTVARPDIDPVLKMLLDTFPVTFTAADGVEVARARLRQLK--TPPELLPELRIEERTV-GYDGLTDIPVRVYWPPVVRDNLPVVVYYHGGGWSLGGLDTHDPVARAHAVGAQAIVVSVDYRLAPEHPYPAGIDDSWAALRWVGENAAELGGDPSRIAVAGDSAGGNISAVMAQLARDVGGPPLVFQLLWYPTTMADLSLPSFTENADAPILDRDVIDAFLAWYVPGLDISDHTMLPTTLAPGNADLSGLPPAFIGTAEHDPLRDDGACYAELLTAAGVSVELSNEPTMVHGYVNFALVVPAAAEATGRGLAALKRALHA |
| 3AIM Chain:C ((41-322)) | -----------------------------ASVEEIRSLFKQFSSLTPREEVG--KIEDITIPGSE--TNIKARVYYPKT-QGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNNSEKFNGKYG-IAVGGDSAGGNLAAVTAILSKK-ENIKLKYQVLIYPAVSFDLITKSLYDNGEGFFLTREHIDWFGQQYLR----SFADLLDFRFSPILADLNDLPPALIITAEHDPLRDQGEAYANKLLQSGVQVTSVEFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKVFYG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3AIM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -151383 for 2512 contacts (-60.3/contact) +
2D Compatibility (PS) -30577 + (NN) -19496 + (LL) 3060
1D Compatibility (HY) -21200 + (ID) 5700
Total energy: -225296.0 ( -89.69 by residue)
QMean score : 0.555
|
|
|