Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYERRHERGMCDRAVEMTDVGATAAPTGPIARGSVARVGAATALAVACVYTVIYLAARDLPPACFSIFAVFWGALGIATGATHGLLQETTREVRWVRSTQIVAGHRTHPLRVAGMIGTVAAVVIAGSSPLWSRQLFVEGRWLSVGLLSVGVAGFCAQATLLGALAGVDRWTQYGSLMVTDAVIRLAVAAAAVVIGWGLAGYLWAATAGAVAWLLMLMASPTARSAASLLTPGGIATFVRGAAHSITAAGASAILVMGFPVLLKVTSDQLGAKGGAVILAVTLTRAPLLVPLSAMQG-NLIAHFVDRRTQRLRALIAPALVVGGIGAVGMLAAGLTGPWLLRVGFGPDYQTGGALLAWLTAAAVAIAMLTLTGAAAVAAALHRAYLLGWVSATVASTLLLLLPMPLETRTVIALLFGPTVGIAIHVAALARRPD |
4QPP Chain:A ((48-376)) | YYECYSDVSVHEEMIA------------DRVRTDAYRLGILRNWAALRGKTVLDVGAG---TGILSIFCAQAGARRVYAVEASAIWQQAREVVRFNGLEDRVHVLP-GPVETVELPEQVDAIVSE---------------WMGYGLLH--------ESMLSSVLHARTKWLKEGGLLLPASAELFIVPISDQMLEWRLG--FWSQVKQHY----------------------GVDMSCLEGFATRCLMGHSEIVVQGL------SGEDVLARP-QRFAQLELSRAGLEQELEAGVGGRFRCSCYGSAPMHGFAIWFQVTFPGGESEKPLVLS--TSPFHPATHWK-------------------QALLYLNEPVQVE------------QDTDVSGEITLLPSRDNPRR-LRVLLRYKVGDQEEKTKDFAMED |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -315634 for 2701 contacts (-116.9/contact) +
2D Compatibility (PS) -33461 + (NN) 6517 + (LL) 6956
1D Compatibility (HY) -11200 + (ID) 3400
Total energy: -350222.0 ( -129.66 by residue)
QMean score : 0.180
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