Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADIPYGTDYPDAPWIDRDGHVLIDDGGKPTQVHRGQARIAYRLAERYQDKLLHVAGIGWHSWDGRRWAADDRGEAKRAVLAEL---RQALSDSLNDKELRADVRKCESASGVAGVLDLAAALVPFAATVADLDSDPHLLNVANGTLDLHTLKLRPHAPADRITKICRGAYQSDTESPLWQAFLTRVLPDEGVRGFVQRLAGVGLLGTVREHVLAILIGVGANGKSVFDKAIRYALG-DYACTAEPDLFMHR-ENAHPTGEMDLRGVRWVAVSESEKDRRLAESTIK--RLTGGDTIRARKMRQDFVE---FTPSHTPLLITNHLPRVPGDDTAIWRRIRVVPFEVVIPADEQDRELDARLQLEADSILSWAVAGWSDYQR-IGLSQPDAVLAATSNYREDSDTIKRFIDDECVTSSPVLKATTTHLFEAWQRWRVQEGVPEISRKAFGQSLDTHGYPVTDKARDGRWRAGIAVRGADDFDD |
| 4US3 Chain:A ((10-450)) | ----------GREQWASRLGFILAAMGSAVG--LGNIWRFSYVTGENGGAAFLLVYLGFIALI------------GIPIVLAEFTIGRRAQSDAVGSFEKLAP-GKPWKVAGLMGVAAGFLILSFYGVIAGWILF--YLFNYITGQL--------WSAPAEGFGGFFEGFIANPTLPLFWQALFMIATIWIVAIGVKKGIERSNKILMPLLGVLLIALAIYSLTLGGAKEGLAFLFSPDWSALKDPGVYLAAISQAFFTLSLGM-GALITYGSYVSKDSRLPGAAVSVAGLDTAFAIIAGIMIFPAVFALGLSPSGGPGLVFVVLPDIFDS----IRLGPIVGIAFFILLGAAALSSAVSL-LEVPVAYFMRKFDWSRKQAAITLGVIITLLGIPSSLSFGVLGEVTIIPGLNIFDSVDFIASSVFLPLGGMIIALFIGWGWKTSDALAESDLTDSVWGKLWILSLRFIAPIAILIVFLSAF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4US3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 31426 for 3914 contacts (8.0/contact) +
2D Compatibility (PS) -45102 + (NN) -8468 + (LL) 2148
1D Compatibility (HY) -19200 + (ID) 4350
Total energy: -43546.0 ( -11.13 by residue)
QMean score : 0.172
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