Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNRQVANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEAAVLGGHDAVFLALPHGHSAVLAQQLSPET----LIIDCGADFRLTDAAVWERFYGS----SHAGSWPYGLPELPGARDQLRGTRRIAVPGCYPTAALLALFPALAADLIEPA-VTVVAVSGTSGAGRAATTDLLGAEVIGSARAYNIAGVHRHTPEIAQGLRAVTDRDVSVSFTPVLIPASRGILATCTARTRSPLSQ--LRAAYEKAYHAEPFIYLMPEGQ----LPRTGAVIGSNAAHIAVAVDEDAQTFVAIAAIDNLVKGTAGAAVQSMNLALGWPETDGLSVVGVAP |
| 5EIO Chain:B ((3-344)) | --------KKTLSIVGASGYAGGEFLRLALSHPY-----LEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFIPPEK--LEPADILVLALPHG---VFAREFDRYSALAPILIDLSADFRLKDPELYRRYYGEHPRPDLLGCFVYAVPEL--YREALKGADWIAGAGCNATATLLGLYPLLKAGVLKPTPIFVTLLISTSAAGAEASPASHHPERAGSIRVYKPTG-HRHTAEVVENLPGRPE----VHLTAIATDRVRGILMTAQCFVQDGWSERDVWQAYREAYAGEPFIRLVKQKKGVHRYPDPRFVQGTNYADIGFELEEDTGRLVVMTAIDNLVKGTAGHALQALNVRMGWPETLGLDFPGLHP |
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General information:
TITO was launched using:
| RESULT:
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Template: 5EIO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224438 for 2859 contacts (-78.5/contact) +
2D Compatibility (PS) -36184 + (NN) -14375 + (LL) 1376
1D Compatibility (HY) -26000 + (ID) 6650
Total energy: -306271.0 ( -107.13 by residue)
QMean score : 0.434
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