Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLTSHGFSRAAVVGAGLMGRRIAGVLASAGLDVAITDTNAEIL------------HAAAVEAARVAGAGR-------GSVAAAADLAAAIPDADLVIEAVVENLAVKQELFERLATLAPD-AVLATNTSVLPIGAVTERVEDGSRVIGTHFWNPPDLIPVVEVVPSARTAPDTADRVVALLTQVGKLPVRVGRDVPGFIGNRLQHALWREAIALVAEGVCDPKTVDLVVRNTIGLRLATLGPLENADYIGLDLTLAIHDAVIPSLNHDP--HPSPLLRELVAAGQLGARTGHGFLDWPAGAREATTARLAQHIAAQLQANEKGRGT |
1F0Y Chain:B ((20-301)) | -----------VIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGKHPVSC-KDTPGFIVNRLLVPYLMEAIRLYERGDASKEDIDTAMKLGAGY---PMGPFELLDYVGLDTTKFIVDGWHEMDAENPLHQPSPSLNKLVAENKFGKKTGEGFYKY----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F0Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139449 for 2054 contacts (-67.9/contact) +
2D Compatibility (PS) -28501 + (NN) -13597 + (LL) 3124
1D Compatibility (HY) -18800 + (ID) 5000
Total energy: -202223.0 ( -98.45 by residue)
QMean score : 0.407
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