Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVARALSDLGKR-MLKVSTHDIEAVTHQPARLLY
1GRJ Chain:? ((80-158))
--MPNNGRVIFGATVTVLNLDSD---------EEQTYRIVGD-----DEADFKQNLISVNSPIARGLIGKEEDDVVVIVEFEVIKVEYL------
General information:
TITO was launched using:
RESULT:
Template:
1GRJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19624 for 476 contacts (-41.2/contact) +
2D Compatibility (PS) -7435 + (NN) -1803 + (LL) 2020
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -30242.0 ( -63.53 by residue)
QMean score : 0.233
(partial model without unconserved sides chains):
PDB file :
Tito_1GRJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GRJ-query.scw
PDB file :
Tito_Scwrl_1GRJ.pdb
: