Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYRYQVRVQQRRSEMNRWVATRSRRHTYQWITDHKSPRDHYRHISELRTSIATSSPGRCDMSPIPRIVSVSLAWAAAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGPVRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNPGARNAAPLQQQALVPRANPGPNPAPNPPATGPQPPNATQLTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVHVTSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSNDGYLYSFGTPPG------RGGSAYLARVPQRFVPDLTKYQYWNGDS-NSWVPNKPDAATPVIPGPVGE-MSVQYNTYLKQYLALYTNGM----NDVVARTAPAPQGPWSAEQ--MLVSSWQM-PGGIYAPMMHPW---STGKDVYFNLSLWSAYNVMLMHTVLP |
| 3C2U Chain:A ((70-267)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGIWAPDLSYADGKFWLIYTDVKVVD--GMWKDCHNYLTTAEDIKGPWSKPIL---L-------------NGAGFDASLFHD-PSGKKYLVNMYWDQRVYHHNFYGIALQEYSVAEE----K---LIGKPEIIYKGT---------DIAYTEGPHLYYIN--DMYYLMTAEGGTTYQHSETIARSKTIHGPYEIQPDYPLLSAWKEVHNPLQKC-GHASLVETQNGQWYLAHLTGR------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C2U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36331 for 1318 contacts (-27.6/contact) +
2D Compatibility (PS) -19815 + (NN) -14330 + (LL) 13600
1D Compatibility (HY) -1600 + (ID) 1150
Total energy: -59626.0 ( -45.24 by residue)
QMean score : 0.325
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