Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQTLTVADFALRLAVGVGCGAIIGLERQWRARMAGLRTNALVATGATLFVLYAVATEDSSPTRVASYVVSGIGFLGGGVILREGFNVRGLNTAATLWCSAAVGVLAASGHLVFTLIGTGTIVAVHLLGRPLGRLVDRDNAVEDEGLQPYQVRVICRPKAETYVRAHIVQRTSSNDITLRGIRTG--PAGDDNITLTAHLLMVGHT-PAKLERLVAELSLQPGVYAVHWYAGEHAQAE |
3O1L Chain:A ((22-98)) | ---------------------------------------------------------------------------------------------------------------------------------------------------TFRLVIACPD--RVGIVAKVSNFLASHNGWITEASHHSDNLSGW-FFMRHEIRA--DTLPFDLDGFREAFTPIAEEFSMDWR-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3O1L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47320 for 471 contacts (-100.5/contact) +
2D Compatibility (PS) -7912 + (NN) -2722 + (LL) 11648
1D Compatibility (HY) -2000 + (ID) 350
Total energy: -48656.0 ( -103.30 by residue)
QMean score : 0.245
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