Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTDVSRKIRAWGRRLMIGTAAAVVLPGLVGLAGGAATAGAFSRPGLPVEYLQVPSPSMGRDIKVQFQSGGNNSPAVYLLDGLRAQDDYNGWDINTPAFEWYYQSGLSIVMPVGGQSSFYSDWYSPACGKAGCQTYKWETFLTSELPQWLSANRAVKPTGSAAIGLSMAGSSAMILAAYHPQQFIYAGSLSALLDPSQGMGPSLIGLAMGDAGGYKAADMWGPSSDPAWERNDPTQQIPKLVANNTRLWVYCGNGTPNELGGANIPAEFLENFVRSSNLKFQDAYNAAGGH-NAVFNFPPNGTHSWEYWGAQLNAMKGDLQSSLGAG |
4MQL Chain:A ((8-284)) | ---------------------------------------------LPVEYLQVPSASMGRDIKVQFQG--GGPHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPSEGWWPTLIGLAMNDSGGYNANSMWGPSSDPAWKRNDPMVQIPRLVANNTRIWVYSGNGTPSDLGGDNIPAKFLEGLTLRTNQTFRDTYAAD-GGRNGVFNFPPNGTHSWPYWNEQLVAMKADIQHVLNG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MQL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112680 for 2535 contacts (-44.4/contact) +
2D Compatibility (PS) -29913 + (NN) -20021 + (LL) 2124
1D Compatibility (HY) -30000 + (ID) 9800
Total energy: -200290.0 ( -79.01 by residue)
QMean score : 0.762
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