Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------------------------------------------------------------------------------------------------MLDYLRDAAEIYRRSFAVIRAEADLARFPADVARVVVRLI-HTCGQVDVAEHVAYTDDVVARAGAALAAGAPVLCDSSMV----AAGITTSRLPADNQIVSLVADPRATELAARRQTTRSAAGVELCAERLPGAVLAIGNAPTALFRLLE---LVDEGAPPPAAVLGGPVG---FVGSAQAKEELIERPRGMSYLVVRGRRGGSAMAAAAVNAIASDRE------------------------------------------------------------------------------------------------------------- |
2GSA Chain:A ((6-432)) | FKTIKSDEIFAAAQKLMPGGVSSPVRAFKSVGGQPIVFDRVKDAYAWDVDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTSFGAPCALENVLAEMVNDAVPSIEMVRFVNSGTEACMAVLRLMRAYTG--------RDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYNDLEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLE-HDALLVFDEVMTG-FRIAYGGVQEKFGVTPDLTTLGKIIGGGLPVGAYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQFEAGFTSLAHTEEDIDATLAAARTVMSAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GSA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72105 for 1582 contacts (-45.6/contact) +
2D Compatibility (PS) -21313 + (NN) -7650 + (LL) 1024
1D Compatibility (HY) -800 + (ID) 1400
Total energy: -102244.0 ( -64.63 by residue)
QMean score : 0.333
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