Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPRARWLQSAALMGALAVVLITAAPVAADAYQVPAPPSPTASCDVISPVAIPCVALGKFADAVAAECRRVGVPDARCVLPLAHRVTQAARDAYLQSWVHRTARFQDALQDPVPLRETQWLGTHNSFNSLSDSFTVSHADSNQQLSLAQQLDIDVRALELDLHYLPRLEGHGAPGVTVCHGLGPKNANLGCTVEPLLATVLPQIANWLNAPGHTEEVILLYLEDQLKNASAYESVVATLDQVLRRADGTSLIYRPNPARRATNGCVPLPLDVSREEIRASGARAVLVGSCAPGWSAAVFDWSGVELESGSNSGYRPYPACDATYGRGVYAWRLVRYYEDSTLATALANPTRPPANPQALTPPKVPAMTDCGVNLFGFDQLLPEDGRIQASLWSWAPDEPRAGAGACALQGADGRWVAASCGDPHPAACRDAAGRWTVTPAPVVFAGAALACTAIGADFTLPRTGNQNARLHAVAGPAGGAWVHYLLPP |
| 2ZKM Chain:X ((312-505)) | -----------------------------------------------------------------------------------------------------------HDMTQPLNHYFINSSHNTYLTAGQ-----FSGLSSAEMYRQVLLSGCRCVELDCWKGKPP----DEEPIITHGFT-------MTTDIFFKEAIEAIAESAFK--TSPYPIILSFENHVDSPRQ----QAKMAEYCRTI-FGDMLLTEPLEK--FPLKPGVPLPSPEDLR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZKM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62388 for 1010 contacts (-61.8/contact) +
2D Compatibility (PS) -15453 + (NN) -8219 + (LL) 18812
1D Compatibility (HY) -2800 + (ID) 1100
Total energy: -71148.0 ( -70.44 by residue)
QMean score : 0.246
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