Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLNTAIATRVNGTPPPEVPIADIELGSLDFWALDDDVRDGAFATLRREAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHPDIFSSYPNITINDQTPELAEYFGSMIVLDDPRHQRLRSIVSRAFTPKVVARIEAAVRDRAHRLVSSMIANNPDR-QADLVSELAGPLPLQIICDMMGIPKADHQRIFHWTN-VILGFGDPDLATDFDEFMQVSADIGAYATALAEDRRVNHHDDLTSSLVEAEVDGERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFDGLAPTAVEEIVRWASPVVYMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLARNPNPHLGFGGGGAHFCLGANLARREIRVAFDELRRQMPDV-VATEEPARLL-SQFIHGIKTLPVTWS |
| 3ZBY Chain:C ((29-394)) | ------------------------------------------------------WMRANEPVFRDRNGLAAATTYQAVLDAERNPELFSSTGGIR-PDQ-PGMP----YMIDMDDPQHLLRRKLVNAGFTRK---RVMDKV-DSIGRLCDTLIDAVCERGECDFVRDIAAPLPMAVIGDMLGVLPTERDMLLKWSDDLVCGLSSHVDEAAIQKLMDTFAAYTEFTKDVITKRRAEPTDDLFSVLVNSEVEGQRMSDDEIVFETLLILIGGDETTRHTLSGGTEQLLRHRDQWDALVADVD-LLPGAIEEMLRWTSPVKNMCRTLTADTVFHGTELRAGEKIMLMFESANFDESVFGDPDNFRIDRNPNSHVAF-GFGTHFCLGNQLARLELRLMTERVLRRLPDLRLADDAPVPLRPANFVSGPESMPVVFT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZBY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199733 for 2930 contacts (-68.2/contact) +
2D Compatibility (PS) -38174 + (NN) -13752 + (LL) 3596
1D Compatibility (HY) -27600 + (ID) 6950
Total energy: -282613.0 ( -96.45 by residue)
QMean score : 0.506
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