Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTAMRGDIRAARERDPAAPTALEVIFCYPGVHAVWGHRLAHWLWQRGARLLARAAAEFTRILTGVDIHPGAVIGARVFIDHATGVVIGETAEVGDDVTIYHGVTLGGSGMVGGKRHPTVGDRVIIGAGAKVLGPIKIGEDSRIGANAVVVKPVPPSAVVVGVPGQVIGQSQPSPGGPFDWRLPDLVGASLDSLLTRVARLEALGGGPQAAGVIRPPEAGIWHGEDFSI
4N6B Chain:B ((88-255))
LRSAAVADLRAARERDPACVSYSHCLLNYKGFLACQAHRVAHLLWRQSRRPLALALHSRIANVFAVDIHPAARIGKGILFDHATGVVVGETAVIGNNVSILHHVTLGGT----GDRHPKIGDGVLIGAGATILGNIKIGEGAKVGAGSVVLIDVPPRTTAVGNPARLV-------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4N6B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -133493 for 1346 contacts (-99.2/contact) +
2D Compatibility (PS) -17954 + (NN) -11160 + (LL) 1940
1D Compatibility (HY) -13200 + (ID) 4050
Total energy: -177917.0 ( -132.18 by residue)
QMean score : 0.597
(partial model without unconserved sides chains):
PDB file :
Tito_4N6B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4N6B-query.scw
PDB file :
Tito_Scwrl_4N6B.pdb
: