Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPGRFRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMT--QAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSG--------VLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG-- |
4TXD Chain:A ((21-369)) | -----KRDVLAELGLGDLRPYLRSIGDKDRIFPKAHRIEVVFLVRAAN-YLLLRTEGAGTINMTTLEYSGGAMEVPVI-QPQKLMAVTRRQMLQLLREYRDSLDEVSKRWLVQEVIGKAKDLGFKKVSEEWNCTIQGMDGFCPHCTIF--GAALTEQHNEKFGGLSIGIKTRVRFDPAFATQRRITPETHNKVTEGHLSM--TGQALFSEVHVEPGTVFIGRAELVDLTEPELVATLYSLATLRELGGRSGIY-----------------GTVRVEILGVKAGKYASTTAYDLAAENAGKGYEEVKKNLKERLEKLGFTP--VDNSKLLAAVDHKDPNGLFKDLWRSSIDFAEKMVKWVEELKGGG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 57812 for 2656 contacts (21.8/contact) +
2D Compatibility (PS) -32745 + (NN) -4829 + (LL) -1284
1D Compatibility (HY) -3600 + (ID) 2200
Total energy: 13154.0 ( 4.95 by residue)
QMean score : 0.150
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