Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSLTLSEASCIASASRWRHIIPAGVVCALIAGIGVGCHGGPSDVVGRAGPDRAHTSITLVAYAV--PEPGWSAVIPAFNASEQGRGVQVITSYGASADQ----SRGVADGKPADLVNFSVEPDIARLVKAGKVDK--DW------D--AD------------ATKGIPFG-SVVTFVVRAGNPK-------NIRDWDDLLRPGIEVITPS-----PLSS-GSA--KWN---LLAPYAAKSDG-G---RN---NQAGIDFVNTLVNEHVKLRPGSGREATDVFVQGSGDVLISYENEAIATER-AGKPVQHV-TPPQ---T---FKIENPLAVVATS--THLGAATAFRNFQYTVQAQKLWAQ-AGFRPVDPAVAADFADLFPVPAKLWTIADLGGWGSVDPQLFDKATGSITKIYLRATG |
| 4MFI Chain:A ((31-354)) | -------------------------------------------------SVKSGSGPIDFWSSHPGQSSAAERELIGRFQDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDD-RWWFHFALSGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGPQSWSEFDEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAGNFYRNS-IHGKGY-AAVANDIANEFATGILASAVASTGSLAGITASARFDFGAAPLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVD--------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4MFI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -61860 for 1926 contacts (-32.1/contact) +
2D Compatibility (PS) -28193 + (NN) -10430 + (LL) 5736
1D Compatibility (HY) -3600 + (ID) 1650
Total energy: -99997.0 ( -51.92 by residue)
QMean score : 0.443
|
|
|