Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIEKLKAALPEYAKDIKLN-LSSITRSSVLDQEQLWGTLLASAAATRNPQVLADIGAEAT-DHLSAAARHAALGA-AAIMGMNNVFYRGR------------------------------------GFLEG-RYDDLRPGLRM-------NIIANPGIPKANFELWSFAVSAINGCSHCLVAHEHTLRTVGVDREAIFEALKAAAIVSGVAQALATIEALSPS |
| 4G9Q Chain:A ((22-231)) | ---DQVRSVAPALEQYTQQRLYGDVWQRPGLNRRDRSLVTIAALIARGEAPALTYYADQALENGVKPSEISETITHLAYYSGWG-KAMATVGPVSEAFAKRGIGQDQLAAVESTPLPLDEEAEAQRATTVGNQFGSVAPGLVQYTTDYLFRDLWLRPDLAPRDRSLVTIAALISVGQVEQITFHLNKALDNGLSEEQAAEVITHLAFYAGWPNA---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G9Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49072 for 1155 contacts (-42.5/contact) +
2D Compatibility (PS) -17777 + (NN) -7221 + (LL) 1280
1D Compatibility (HY) 2400 + (ID) 650
Total energy: -71040.0 ( -61.51 by residue)
QMean score : 0.418
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