Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTERTLVLIKPDGIERQLIGEIISRIERKGLTIAALQLRTVSAELASQHYAEHEGKPFFGSLLEFITSGPVVAAIVEGTRAIAAVRQLAGGTDPVQAAAPGTIRGDFALETQ---FNLVHGSDSAESAQREIALWFPGA
2DY9 Chain:B ((7-140))
-TERTLVIIKPDAVVRGLIGEIISRFEKKGLKIVGMKMIWIDRELAEKHYEEHREKPFFKALIDYITKTPVVVMVLEGRYAVEVVRKMAGATDP-KDAAPGTIRGDFGLEVSDAICNVIHASDSKESAEREISLFF---
General information:
TITO was launched using:
RESULT:
Template:
2DY9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79656 for 1020 contacts (-78.1/contact) +
2D Compatibility (PS) -14164 + (NN) -4986 + (LL) 232
1D Compatibility (HY) -16000 + (ID) 3800
Total energy: -118374.0 ( -116.05 by residue)
QMean score : 0.580
(partial model without unconserved sides chains):
PDB file :
Tito_2DY9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DY9-query.scw
PDB file :
Tito_Scwrl_2DY9.pdb
: