Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNEQHFADDGDIKQLSLDETRSAAKQLLDSVEGDLTGDVAQRFQALTRHAEELRAEQRRRGREAEEALRRCRAGELRVVPGAPTGGDDGDAPPGNSLRDIAFRTLDVCVRDGLMSSRAAEAAETLCRTGPPQSTSWAQRWLAATGNRDYLGAFVKRVSNPVAGHTTWTDREAAAWREAAAVAAEQRAMGLVDTAGGFLIPAALDPAILLSGDGSTNPIRQVARVVQ-TTSE--VWRG--VTS-EGAEAHWYSEAQEVSDDSPTLAQPAVPSYRGSCWIPFSLEIEGDA----AGFVAEVGRVLADSVEQLQAAAFVSGSGNGEPTGFVSALTGTADYTVTGAGTEAVVAADVYALQSALPPRF-QSNSAFAANLSTINVLRQAETANGALKFPSLHASPPMLAGKHIWEVSNMDTVDAAVTATNYPLVLGDWK--QFIITDRVGSTVELVPHVFGGNRRPTGQRGFFCWFRVGSDVLVDNAFRVLKVQTTA |
| 4PT2 Chain:P ((20-278)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LNETVI-QVARRSLVGRRILDIYGPLGAGVQTVPYDEFQGVSPGAVDIVGE-QETAMVFTDA-RKFKTIPIIYKDFLLHWRDIEAARTHNMPLDVSAAAGAAALCAQQEDELIFYGDARLGYEGLMTANGRLTVP-LGDWTSPGGGFQAIVEATRKLNEQGHFGPYAVVLSPRLYSQLHRIYEKTGVLEIET----IRQLASDGVYQSNRLRG---------ESGVVVSTGRENMDLAVSMDMVAAYLGA-------SRMNHPFRVLEALLLRIKHPDAICTL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PT2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76829 for 1754 contacts (-43.8/contact) +
2D Compatibility (PS) -25606 + (NN) -4238 + (LL) 15108
1D Compatibility (HY) -4800 + (ID) 1100
Total energy: -97465.0 ( -55.57 by residue)
QMean score : 0.185
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