Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPYEDLLRFVLETGTPKSDRTGTGTRSLFGQQMRYDLSAGFPLLTTKKVHFKSVAYELLWFLRGDSNIGWLHEHGVTIWDEWASDTGELGPIYGVQWRSWPAPSGEHIDQISAALDLLRTDPDSRRIIVSAWNVGEIERMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYALLTHMMAAQAGLSVGEFIWTGGDCHIYDNHVEQVRLQLSREPRPYPKLLLADRDSIFEYTYEDIVVKNYDPHPAIKAPVAV
3QJ7 Chain:C ((2-262))
MTPYEDLLRFVLETGTPKSD--GTGTRSLFGQQMRYDLSAGFPLLTTKKVHFKSVAYELLWFLRGDSNIGWLHEHGVTIWDEWASDTGELGPIYGVQWRSWPAPSGEHIDQISAALDLLRTDPDSRRIIVSAWNVGEIERMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYALLTHMMAAQAGLSVGEFIWTGGDCHIYDNHVEQVRLQLSREPRPYPKLLLADRDSIFEYTYEDIVVKNYDPHPAIKAPV--
General information:
TITO was launched using:
RESULT:
Template:
3QJ7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -193337 for 2051 contacts (-94.3/contact) +
2D Compatibility (PS) -27792 + (NN) -16542 + (LL) 488
1D Compatibility (HY) -38800 + (ID) 12950
Total energy: -288933.0 ( -140.87 by residue)
QMean score : 0.633
(partial model without unconserved sides chains):
PDB file :
Tito_3QJ7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QJ7-query.scw
PDB file :
Tito_Scwrl_3QJ7.pdb
: