Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRRRLAIVQRWRGQDEIPTDWGRCVLTIGVFDGVHRGHAELIAHAVKAGRARGVPAVLMTFDPHPMEVVYPGSHPAQLTTLTRRAELVQDLGIEVFLVMPFTTDFMKLTPDRFIHELLVEHLHVVEVVVGENFTFGKKAAGNVDTLRRAGERFGFAVESMSLVSEHHSNETVTFSSTYIRSCVDAGDMVAAMEALGRPHRVEGVVVRGEGRGA-ELGFPTANVAPPMYSAIPADGVYAAWFTVL-GHGPVTGTVVPGERYQAAVSVGTNPTFSGRTRTVEAFVLDTTADLYGQHVALDFVGRIRGQKKFESVRQLVAAMGADTERARDLLSTG |
| 5A8A Chain:B ((4-137)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HFYVTGPVVRGAGRGGKELGFPTANQYFHDTVALPADGVYAGWLTILPTEAPVSGNMEPEVAYAAAISVGTNPTFGDEQRSVESFVLDRDADLYGHDVKVEFVDHVRAMEKFDSVEQLLEVMAKDVQKTRTLLA-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 5A8A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -73350 for 967 contacts (-75.9/contact) +
2D Compatibility (PS) -14272 + (NN) -7479 + (LL) 14868
1D Compatibility (HY) -12400 + (ID) 3500
Total energy: -96133.0 ( -99.41 by residue)
QMean score : 0.481
|
|
|