Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGRPLHAFEVVATRHLAPHMVRVVLGGSG--FDTFVPSDFTDSYIKLVFVDDDVDVGRLPRP-LTL---DSFADLP---TAKRPPVRTMTVRHVDAAAREIAVDIVL---------HGEHGVAGPWAAGAQRGQPIYLMGPGGAYAPDPAADWHLLAGDESAIPAIAAALEALPP----DAIGRAFIEVAGPDDEIG---LT----APDAVEVNWVYRGGRADLVPEDRAGDHAPLIEAVT-TT----AWLPGQVHVFIHGEAQAVMHNLRPYVRNERGVDAKWASSISGYWRRGRTEEMFRKWKKELAEAEAGTH |
| 4P6V Chain:F ((131-408)) | ----KKWECTVISNDNKATFIKELKLAIPDGESVPFRA----GGYIQIEAPAHHVKYADFDVPEKYRGDWDKFNLFRYESKVDEPIIRAYSMANYPEEFGIIMLNVRIATPPPNNPNVP-PGQMSSYIWSLKAGDKCTISGPFGEFFAKDTDAEMVFIGGGAGMAPMRSHIFDQLKRLKSKRKMSYWYGARSKREMFYVEDFDGLAAENDNFVWHCALSDPQPEDNWTGYTG----FIHNVLYENYLKDHEAPEDCEYYMCGPPM-MNAAVINMLKN-LGVE-EENILLDDFGG----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132928 for 1914 contacts (-69.5/contact) +
2D Compatibility (PS) -26649 + (NN) -13791 + (LL) 2748
1D Compatibility (HY) -10800 + (ID) 1400
Total energy: -182820.0 ( -95.52 by residue)
QMean score : 0.301
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