Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDAVRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTV-SKLVDIGAVAADYTMVAILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELAREAGV-V-GKVPDCINSGKYIEKVDG---LAAAVNVHATPTVRVNGTEYEWS-TPAALVAKIKEIVGDVPGIDSAAATATS |
| 4PWO Chain:A ((69-249)) | --------------------------------------------------------------------PFAVGAVDAPLVITEFSDFECPFCARWSNQTEPTLMEEYVSKGLVRIEWNDLPVNG-----EHALAAAKAGRAAAAQ--GKFDEFRKALFE--ASRNVSGHPNNTLKDFERFARNAGVKDMERFSREAQDSTYDEVLAKAADYAHGLGVSGTPAFVVGTQYISGAQPTEEFIKVIESELKKSPTFSTPSS---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PWO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105550 for 1358 contacts (-77.7/contact) +
2D Compatibility (PS) -18512 + (NN) -7029 + (LL) 4376
1D Compatibility (HY) -4800 + (ID) 1800
Total energy: -133315.0 ( -98.17 by residue)
QMean score : 0.464
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