Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKF-EVPDGWTVQAFRFTLDPTEDQAKALARHFGARRKAYNWTVATLKAD---------IQAWHASGTVTAKPSLRVLRKRWNTVKDDVCVNTETGVAW-WPECSK-----EAYADGIAGAVEAYW---------------------NWQ-------TSRAG-------KRAGKRVGFPRFKRKGRDQDRVSF-TTGAMRVEP-DRRHLTLPVIGTVR-THENTRRIERLIKAGRARVLAIS------------VRRNGTRLDASV-RVLVQRPQQPKVVHPGSRVG-VDVGVRRLATVATADGTAI-EQVENPRPLGAALRELRHVCRARSRCTKGSRRYRERTTQISRLH-RRVNDVRTHHLHVLT-----TRLAQTHGRIVVEGL-DATEMLRQKGLPGARARRRGLSDAALGTPRRHLSYKT-------VWYGSALVVADRWFPSSKTCHACRHVQDIGWDEQWQCDRCSVVHQRDDCAAINLARYE-ETSSIVGPVGAAVKRGADRKTGPRPAGGCEARKGSSPKAAEQPRDGVQVA |
| 3VWA Chain:A ((5-544)) | -PLHMSISN----FQFPYTIEETAITETALWQCFDGTRKADSLPVTVFKAKRSPENESLILNAVHKSKILK-IPGLCTVLETFDSDPQSTFIVTERVVPFPWDNLGSLSQNKFGVELGISQLLATLGFLKNFVLGTLSKDSVFINIKGEWVLFGLELCSSKEGLSAFEFASRARSYYNIIGSQLPCEDPNTIDSMGLGLLIKSLMAPSCLPKDWIVNVNMISDGKITIENFRKRLENTETWRSNPLINFYQELRELHIKDPQGKLVVMSNLENLYLESREIFRNLTPGMIE---NFIIPELCEIIKLLMTQSISSNASHKLVPFLAIVLDLTSETNTFPVGFNDLITQSFKLPDRQVRFLLLIYLPKLIGPLSKSEISSRIYPHFIQGLTDSDATLRLQTLKTIPCIVSCLTERQLNNELLRFLAKTQVDSDVEIRTWTVIIISKISTILSTSVGNRSNILATAFTKSLKDPQ--VKPRLAALYGLEKSIELFDVNTIANKILTVIAPGLLDKS-PIVRGRAKILFEEYLEKLEKEAQLIQTN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 75141 for 2958 contacts (25.4/contact) +
2D Compatibility (PS) -44733 + (NN) -2563 + (LL) 648
1D Compatibility (HY) 10400 + (ID) 1250
Total energy: 37643.0 ( 12.73 by residue)
QMean score : 0.019
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