Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MTASTALTV-AIWIGVMLIG----GIGSVLRFLVDRSVARRLARTF--PYGTLTVNITGAALLGFLAGLA--LPKDAALLAGTGFVG------------------AYTTFSTWMLET-QRLGEDRQMVSALANIVVSVVLGLAAALLGQWIAQI-
3MVC Chain:A ((1-161))
LHLTQPQILFVRKTWNHARNQGALEPAISIFRNSFFKNPEIRQMIMFGTKNEGHERLKKHAQLFTVLMDDLIANLDSPSATVAGLREAGEKHVWPTRNQYGCPFHAHLLDQFATAMIERTLEWDRTETTQRGWTKIVLFVTEQLKEGFQDEQKRARR
General information:
TITO was launched using:
RESULT:
Template:
3MVC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90575 for 840 contacts (-107.8/contact) +
2D Compatibility (PS) -13100 + (NN) -7312 + (LL) 0
1D Compatibility (HY) -800 + (ID) 1100
Total energy: -112887.0 ( -134.39 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_3MVC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MVC-query.scw
PDB file :
Tito_Scwrl_3MVC.pdb
: