Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------MTPNAASTGDSAKNTITGCCLITARALVARTRSISLPGMPFRMPADYHNASSDEPTNRHPWPAPARCCRHEWRTMRRTNACDRRRFGLSLTIHEDACRIISVVPVVLEVRRAEPAHPATPYPEPLARCSRSPGLNESSHMSGRIPP
1SOX Chain:A ((344-466))
ELPVQSAVTQPRPGAAVPPGELTVKGYAWSGGGREVVRVDVSLDGGRTWKVA--RLMGDKAPPGRAWAW----------------------ALWELTVPVEAGT-------ELEIVCKAVDSSYNVQPDSVAPIWNLRGVLSTAWHRVRVSVQD
General information:
TITO was launched using:
RESULT:
Template:
1SOX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3303 for 766 contacts (-4.3/contact) +
2D Compatibility (PS) -11823 + (NN) -2719 + (LL) 2368
1D Compatibility (HY) -1200 + (ID) 550
Total energy: -17227.0 ( -22.49 by residue)
QMean score : 0.193
(partial model without unconserved sides chains):
PDB file :
Tito_1SOX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SOX-query.scw
PDB file :
Tito_Scwrl_1SOX.pdb
: