Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGRSERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRH--GDVVINCAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQRVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAAPANSTSIDRRLPSTRD |
| 3SC6 Chain:B ((5-277)) | ----KERVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGD----RPEGYDEFHNPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLY-GKYGNNFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTSLYG-TYHVSNTGSCSWFEFAKKIFSYANMKV-NVLPVST----AAAARPKYSIFQHNMLRLNGFLQMPSWEEGL---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SC6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140779 for 2309 contacts (-61.0/contact) +
2D Compatibility (PS) -29357 + (NN) -16233 + (LL) 1876
1D Compatibility (HY) -23600 + (ID) 5150
Total energy: -213243.0 ( -92.35 by residue)
QMean score : 0.531
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