Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSKAKVAIVGSGNISTDLLYKLLRSEWLEPRW-MVGIDPESDGLARAAKLGLETTHEGVDWLLAQPD-KPDLVFEATSAYVHRDAAPKYAEAGIRAIDLTPAAVGPAVIPPANLREHLDAPNVNMITCGGQATIPIVYAVSRIVEVPYAEIVASVASVSAGPGTRANIDEFTKTTARGVQTIGGAARGKAIIILNPADPPMIMRDTIFCAIPTDADREAIAASIHDVVKEVQTYVPGYRLLNEPQFDEPSINSGGQALVTTFVEVEGAGDYLPPYAGNLDIMTAAATKVGEEIAKETLVVGGAR |
| 4LRT Chain:B ((20-314)) | HMGKAVAAIVGPGNIGTDLLIKLQRSEHIEVRYMVGVDPASEGL-ARARKLGVEASAEGVDWLLEQ-DELPDLVFEATSAKAHLANAPRYAEAGITAIDLTPAAVGPLVCPPVNLTEHLDAPNVNMITCGGQATIPIVHAVSRVVPVAYAEIVAAIASRSAGPGTRANIDEFTETTAAAIEQVGGAARGKAIIILNPVEPPMIMRDTVYCAIPPDADTDAITASIEEMVAEVARYVPGYTLRTEPQYDQPRDIWKGMARVAVFLEVRGNGDYLPPWAGNLDIMTAAAARVGELLAQA-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LRT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166712 for 2670 contacts (-62.4/contact) +
2D Compatibility (PS) -31564 + (NN) -15497 + (LL) 548
1D Compatibility (HY) -26800 + (ID) 10000
Total energy: -250025.0 ( -93.64 by residue)
QMean score : 0.568
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