Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALDLTAYFDRINYRGATDPTLDVLQDLVTVHSRTIPFENLDPLLGVPVDDLSPQALADKLVLRRRGGYCFEHNGLMGYVLAELGYRVRRFAARVVWKLAPDAPLPPQTHTLLGVTFPGSGGCYLVDVGFGGQTPTSPLRLETGAVQPTTHEPYRLEDRVDGFVLQAMVRDTWQTLYEFTTQTRPQIDLKVASWYASTHPASKFVTGLTAAVITDDARWNLSGRDLAVHRAGG-TEKIRLADAAAVVDTLSERFGINVADIGERGALETRIDELLARQPGADAP |
| 4NV7 Chain:B ((41-304)) | --FDLDAYLARIGYTGPRNASLDTLKALHFAHPQAIPWENIDPFLGRPVR-LDLAALQDKIVLGGRGGYCFEHNLLFMHALKALGFEVGGLAARVLWGQSEDA-ITARSHMLLRVELDGR--TYIADVGFGGLTLTAPLLLEPGREQKTPHEPFRIVEADDHFRLQAAIGGDWRSLYRFDLQPQYEVDYSVTNYFLSTSPTSHFLSSVIAARAAPDRRYALRGNRLSIHHLGGRTEQTEIATAADLADTLQGLLGIIIPD---RTAFEAKVRE----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NV7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139375 for 2137 contacts (-65.2/contact) +
2D Compatibility (PS) -28146 + (NN) -10830 + (LL) 404
1D Compatibility (HY) -22400 + (ID) 5900
Total energy: -206247.0 ( -96.51 by residue)
QMean score : 0.457
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